16:00 - 19:00 |
Welcome and registration |
18:00 |
Cocktail offered by the City Hall of Lyon |
8:45 | Opening Remarks |
Sorin Istrail General RECOMB Vice-Chair, 1999 Program Committee Chair | |
Mireille Régnier RECOMB 1999 Conference Chair | |
Ron Shamir RECOMB 2000 Program Committee Chair |
9:00 |
Distinguished New Technologies Lecture |
10:00 |
Short break |
10:05 |
Algorithms for Choosing Differential Gene Expression Experiments |
10:30 |
An Algorithm for Clustinering cDNAs for Gene Expression Analysis |
10:55 |
A Dictionary Based Approach for Gene Annotation |
11:20 |
Break |
11:45 |
De Novo Peptide Sequencing via Tandem Mass Spectrometry: A
Graph-Theoretical Approach |
12:10 |
On the Power of Universal Bases in Sequencing by
Hybridization |
12:35 - 14:00 |
Lunch |
14:00 |
Distinguished Biology Lecture |
15:00 |
Short break |
15:05 |
Recognition of Remote Protein Homologies Using Three-Dimensional
Information to Generate a Position Specific Scoring Matrix in
the Program 3D-PSSM |
15:30 |
A Solvation Potential with Improved Contact Definitions and
Optimized by Extensive Threading |
15:55 |
Fast Detection of Common Geometric Substructure in Proteins |
16:20 |
Break |
16:45 |
Plenary Lecture Session |
18:00 - 20:00 |
Business Meeting |
8:30 |
Plenary Lecture Session |
9:30 |
Short break |
9:35 |
Reconstructing the Pre-Doubling Genome |
10:00 |
Formulations and Hardness of Multiple Sorting by Reversals |
10:25 |
Probability Models for Genome Rearrangement and Linear Invariants
for Phylogenetic Inference |
10:50 |
Break |
11:15 |
Modeling Protein Families Using Probabilistic Suffix Trees |
11:40 |
Faster Reliable Phylogenetic Analysis |
12:05 |
Obtaining Highly Accurate Topology Estimates of Evolutionary
Trees from Very Short Sequences |
12:30 - 14:00 |
Lunch |
14:00 |
Plenary Lecture Session |
15:00 |
Short break |
15:05 |
Searching Gene Transfers on Bacillus Subtilis Using Hidden Markov Models |
15:30 |
Significance Testing for Genomic Mismatch Scanning |
15:55 |
Break |
16:20 |
Classifying Proteins by Family Using the Product of Correlated p-values |
16:45 |
Sequence Homology Detection Through Large Scale Pattern Discovery |
8:30 |
Plenary Lecture Session |
9:30 |
Short break |
9:35 |
Algorithms for Whole Genome Shotgun Sequencing |
10:00 |
Construction of Physical Maps from Oligonucleotide Fingerprints Data |
10:25 |
Computing Physical Maps of Chromosomes with Nonoverlapping Probes by Branch-and-Cut |
10:50 |
Break |
11:15 |
A Method for Optimal Design of a Threading Scoring Function |
11:40 |
An Anytime Algorithm for Gapped Block Protein Threading with Pair Interactions |
12:05 |
Efficient Algorithms for Protein Sequence Design and the Analysis of Certain Evolutionary Fitness Landscapes |
12:30 - 14:00 |
Lunch |
14:00 |
Plenary Lecture Session |
15:00 |
Short break |
15:05 |
An Analytic Study of the Phase Transition Line in Local Sequence Alignment with Gaps |
15:30 |
Winnowing Sequences from a Database Search |
15:55 |
q-gram Based Database Searching Using a Suffix Array (QUASAR) |
16:20 |
Break |
16:45 |
Stanislaw Ulam - Computational Biology Address |
18:00 |
Departure to Saint-Romain-en-Gal |
19:00 |
Visit of the Museum |
20:00 |
Cocktail offered by Conseil Général du Rhône |
9:00 |
Plenary Lecture Session |
10:00 |
Short break |
10:05 |
Efficient Database Screening for Rational Drug Design Using Pharmacophore-Constrained Conformational Search |
10:30 |
Coupled Optimization in Protein Docking |
10:55 |
Derivation of Sensitive Discrimination Potential for Virtual Ligand Screening |
11:20 |
Break |
11:45 |
Optimizing Combinatorial Library Construction via Split Synthesis |
12:10
|
Internal Loops in RNA Secondary Structure Prediction |
12:35 - 14:00
| Lunch |
14:00 |
Identifying Gene Regulatory Networks from Experimental Data |
14:25 |
Evolution of Metabolisms: A New Method for the Comparison of Metabolic Pathways |
14:50 |
Clustering Gene Expression Patterns |
15:15 |
Closing session |
15:30 |
End of the conference |